Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | DW921_01235 | Not Available | - | 239768 - 240229 | 16946.7 |
| duf4488 domain-containing protein | DW921_01240 | Not Available | - | 240585 - 241073 | 18205.2 |
| asparagine--trna ligase | DW921_01245 | Not Available | - | 241266 - 242669 | 53574.2 |
| rrna pseudouridine synthase | DW921_01250 | Not Available | - | 242765 - 244036 | 48525.6 |
| adenylosuccinate lyase | DW921_01255 | Not Available | - | 244085 - 245431 | 50931.9 |
| alpha-n-acetylglucosaminidase | DW921_01260 | Not Available | - | 246123 - 248279 | 83071.8 |
| hypothetical protein | DW921_01265 | Not Available | - | 248308 - 250692 | 90835.9 |
| ragb/susd family nutrient uptake outer membrane protein | DW921_01270 | Not Available | - | 250871 - 252364 | 56139.6 |
| susc/raga family tonb-linked outer membrane protein | DW921_01275 | Not Available | - | 252390 - 255767 | 123914.0 |
| fecr family protein | DW921_01280 | Not Available | - | 255911 - 256927 | 38841.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
