Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| faa hydrolase family protein | DW921_01185 | Not Available | - | 228573 - 229190 | 23259.9 |
| redox-sensing transcriptional repressor rex | DW921_01190 | Not Available | - | 229200 - 229853 | 24353.5 |
| translation initiation factor | DW921_01195 | Not Available | + | 229966 - 230304 | 12812.3 |
| tolc family protein | DW921_01200 | Not Available | - | 230545 - 231867 | 49436.2 |
| acrb/acrd/acrf family protein | DW921_01205 | Not Available | - | 231864 - 234974 | 115568.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW921_01210 | Not Available | - | 234987 - 236018 | 37228.0 |
| arac family transcriptional regulator | DW921_01215 | Not Available | + | 236231 - 237145 | 35225.4 |
| elongation factor ts | DW921_01220 | Not Available | - | 237222 - 238214 | 35502.9 |
| 30s ribosomal protein s2 | DW921_01225 | Not Available | - | 238345 - 239184 | 30573.1 |
| 30s ribosomal protein s9 | DW921_01230 | Not Available | - | 239375 - 239761 | 14551.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
