Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anaerobic ribonucleoside-triphosphate reductase activating protein | DW921_01085 | Not Available | + | 208941 - 209432 | 18561.0 |
| s9 family peptidase | DW921_01090 | Not Available | - | 210698 - 213127 | 93341.3 |
| rip metalloprotease rsep | DW921_01095 | Not Available | - | 213367 - 214707 | 50866.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DW921_01100 | Not Available | - | 214762 - 215934 | 42657.5 |
| m23 family peptidase | DW921_01105 | Not Available | - | 215940 - 216797 | 31820.1 |
| 16s rrna processing protein rimm | DW921_01110 | Not Available | - | 216829 - 217344 | 19768.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DW921_01115 | Not Available | - | 217356 - 218663 | 47689.1 |
| duf4290 domain-containing protein | DW921_01120 | Not Available | - | 218689 - 219285 | 23394.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DW921_01125 | Not Available | - | 219316 - 220011 | 25081.2 |
| yicc family protein | DW921_01130 | Not Available | + | 220111 - 220986 | 33855.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
