Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter atp-binding protein | DW921_01030 | Not Available | + | 197370 - 198122 | 27979.7 |
| phosphate transport system regulatory protein phou | DW921_01035 | Not Available | + | 198158 - 198841 | 26387.6 |
| maturase | DW921_01045 | Not Available | - | 199041 - 199517 | 18856.4 |
| group ii intron reverse transcriptase/maturase | DW921_01050 | Not Available | - | 199760 - 200640 | 33779.8 |
| diaminopimelate dehydrogenase | DW921_01055 | Not Available | - | 201137 - 202036 | 32326.9 |
| holliday junction branch migration protein ruva | DW921_01060 | Not Available | + | 202211 - 202807 | 21381.3 |
| superoxide dismutase | DW921_01065 | Not Available | + | 202940 - 203515 | 21864.1 |
| hypothetical protein | DW921_01070 | Not Available | - | 203653 - 204486 | 30621.6 |
| hd domain-containing protein | DW921_01075 | Not Available | + | 204592 - 206025 | 54748.2 |
| anaerobic ribonucleoside triphosphate reductase | DW921_01080 | Not Available | + | 206540 - 208927 | 90387.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
