Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | + | 922 - 995 | Not Available |
| patatin | DW921_00050 | Not Available | - | 1077 - 3389 | 87906.1 |
| hypothetical protein | DW921_00055 | Not Available | + | 3590 - 4063 | 17895.7 |
| hypothetical protein | DW921_00060 | Not Available | - | 4139 - 5077 | 36458.9 |
| mboat family protein | DW921_00065 | Not Available | - | 5090 - 6529 | 56442.4 |
| molecular chaperone htpg | DW921_00070 | Not Available | - | 6704 - 8752 | 78307.3 |
| 16s ribosomal rna | Not Available | Not Available | + | 10340 - 11874 | Not Available |
| atp-dependent clp protease atp-binding subunit | DW921_00075 | Not Available | - | 8942 - 11491 | 95959.9 |
| dna gyrase subunit a | DW921_00080 | Not Available | + | 11740 - 14304 | 96594.7 |
| 23s ribosomal rna | Not Available | Not Available | + | 12317 - 15205 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
