Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DW921_00730 | Not Available | + | 134546 - 135436 | 33420.7 |
| hypothetical protein | DW921_00735 | Not Available | - | 135567 - 136037 | 17963.7 |
| hypothetical protein | DW921_00740 | Not Available | - | 136165 - 136353 | 7362.06 |
| ghkl domain-containing protein | DW921_00745 | Not Available | + | 136397 - 137524 | 43798.2 |
| dna-binding response regulator | DW921_00750 | Not Available | + | 137521 - 138246 | 27965.2 |
| alcohol dehydrogenase | DW921_00755 | Not Available | - | 138269 - 139312 | 37963.5 |
| aaa family atpase | DW921_00760 | Not Available | + | 139713 - 141590 | 72048.3 |
| porin | DW921_00765 | Not Available | - | 141688 - 142698 | 39148.5 |
| yigz family protein | DW921_00770 | Not Available | - | 142776 - 143375 | 22806.5 |
| duf1015 domain-containing protein | DW921_00775 | Not Available | - | 143476 - 144723 | 46872.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
