Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cobyrinate a,c-diamide synthase | DW921_00425 | Not Available | - | 86342 - 87670 | 49487.6 |
| mbl fold metallo-hydrolase | DW921_00430 | Not Available | + | 87774 - 88580 | 30189.3 |
| nucleoside-diphosphate kinase | DW921_00435 | Not Available | + | 88790 - 89266 | 18001.9 |
| Trna-lys | Not Available | Not Available | + | 89436 - 89511 | Not Available |
| Trna-lys | Not Available | Not Available | + | 89545 - 89620 | Not Available |
| Trna-lys | Not Available | Not Available | + | 89654 - 89729 | Not Available |
| site-specific integrase | DW921_00455 | Not Available | - | 90060 - 91253 | 46194.4 |
| hypothetical protein | DW921_00460 | Not Available | + | 91299 - 91586 | 10780.9 |
| hypothetical protein | DW921_00465 | Not Available | - | 91576 - 91902 | 11742.8 |
| hypothetical protein | DW921_00470 | Not Available | + | 91941 - 92267 | 12035.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
