Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Dorea |
| Species | Dorea formicigenerans |
| Strain | strain AM42-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1045947 bp
Thymine Count
955694 bp
Guanine Count
733057 bp
Cytosine Count
617338 bp
Genome Length
3352156 bp
Protein-coding Genes
3009 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated helicase cas3' | DW924_04020 | Not Available | Positive | 829984 - 832422 | 93556.3 |
| type i-c crispr-associated protein cas5 | DW924_04025 | Not Available | Positive | 832437 - 833180 | 29042.6 |
| type i-c crispr-associated protein cas8c/csd1 | DW924_04030 | Not Available | Positive | 833177 - 835123 | 75764.4 |
| type i-c crispr-associated protein cas7/csd2 | DW924_04035 | Not Available | Positive | 835142 - 835990 | 31403.1 |
| crispr-associated protein cas4 | DW924_04040 | Not Available | Positive | 835992 - 836657 | 25711.1 |
| type i-c crispr-associated endonuclease cas1 | DW924_04045 | Not Available | Positive | 836654 - 837685 | 39262.7 |
| crispr-associated endonuclease cas2 | DW924_04050 | Not Available | Positive | 837697 - 837987 | 11152.6 |
| xre family transcriptional regulator | DW924_04065 | Not Available | Negative | 840546 - 840797 | 9844.0 |
| laci family transcriptional regulator | DW924_04070 | Not Available | Positive | 841166 - 842155 | 36108.7 |
| 3-dehydro-l-gulonate 2-dehydrogenase | DW924_04075 | Not Available | Positive | 842495 - 843496 | 36612.9 |
Pathways
1379 pathways
Health Effects
No health effects information available for this bacterium.
