Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam family heme chaperone hemw | DW935_04750 | Not Available | Positive | 1145314 - 1146444 | 43528.7 |
| hypothetical protein | DW935_04755 | Not Available | Positive | 1146582 - 1146773 | 7368.51 |
| arc family dna-binding protein | DW935_04765 | Not Available | Negative | 1149359 - 1149553 | 7483.19 |
| spfh domain-containing protein | DW935_04770 | Not Available | Negative | 1149562 - 1150512 | 35395.3 |
| tetratricopeptide repeat protein | DW935_04780 | Not Available | Positive | 1151084 - 1153084 | 76833.1 |
| threonylcarbamoyl-amp synthase | DW935_04785 | Not Available | Positive | 1153091 - 1153705 | 23133.3 |
| mechanosensitive ion channel family protein | DW935_04790 | Not Available | Positive | 1153754 - 1154587 | 30695.9 |
| fpra family a-type flavoprotein | DW935_04795 | Not Available | Negative | 1154683 - 1155870 | 44710.8 |
| tigr01212 family radical sam protein | DW935_04800 | Not Available | Negative | 1155886 - 1156812 | 35509.8 |
| s9 family peptidase | DW935_04805 | Not Available | Positive | 1156899 - 1159100 | 83302.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

