Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mce family protein | DW935_04650 | Not Available | Positive | 1121849 - 1122736 | 32671.6 |
| chromosomal replication initiator protein dnaa | DW935_04655 | Not Available | Positive | 1123074 - 1124480 | 53559.4 |
| nadph-dependent oxidoreductase | DW935_04660 | Not Available | Negative | 1124565 - 1125305 | 28380.1 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | DW935_04665 | Not Available | Positive | 1125649 - 1128195 | 96377.2 |
| hypothetical protein | DW935_04670 | Not Available | Negative | 1128288 - 1131260 | 110688.0 |
| dihydroneopterin aldolase | DW935_04675 | Not Available | Positive | 1131422 - 1131790 | 13945.8 |
| radical sam protein | DW935_04680 | Not Available | Negative | 1131937 - 1132818 | 33132.9 |
| glycosyltransferase family 2 protein | DW935_04685 | Not Available | Negative | 1132906 - 1133931 | 39378.6 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DW935_04690 | Not Available | Negative | 1133967 - 1135283 | 49152.8 |
| long-chain fatty acid--coa ligase | DW935_04695 | Not Available | Positive | 1135389 - 1137062 | 63271.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

