Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DW935_04550 | Not Available | Positive | 1104412 - 1105281 | 32818.4 |
| hypothetical protein | DW935_04555 | Not Available | Positive | 1105646 - 1105933 | 10650.2 |
| sugar o-acetyltransferase | DW935_04560 | Not Available | Positive | 1105948 - 1106523 | 20877.8 |
| hypothetical protein | DW935_04565 | Not Available | Negative | 1106545 - 1106724 | 6327.56 |
| alpha/beta hydrolase | DW935_04570 | Not Available | Positive | 1107006 - 1108061 | 39316.1 |
| duf3737 family protein | DW935_04575 | Not Available | Positive | 1108177 - 1109043 | 33258.2 |
| pyridoxal phosphate-dependent aminotransferase | DW935_04580 | Not Available | Positive | 1109053 - 1110216 | 44389.1 |
| arsr family transcriptional regulator | DW935_04585 | Not Available | Positive | 1110738 - 1111064 | 12236.9 |
| thioredoxin family protein | DW935_04590 | Not Available | Positive | 1111142 - 1111375 | 8315.35 |
| thioredoxin | DW935_04595 | Not Available | Positive | 1111386 - 1111829 | 16803.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

