Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1016 domain-containing protein | DW935_04490 | Not Available | Negative | 1089204 - 1090334 | 44015.8 |
| sam-dependent dna methyltransferase | DW935_04495 | Not Available | Negative | 1090338 - 1091756 | 53122.5 |
| dead/deah box helicase | DW935_04500 | Not Available | Negative | 1091761 - 1094463 | 102533.0 |
| xre family transcriptional regulator | DW935_04505 | Not Available | Negative | 1094554 - 1094763 | 8031.9 |
| giy-yig nuclease family protein | DW935_04510 | Not Available | Positive | 1094887 - 1095714 | 31201.8 |
| hypothetical protein | DW935_04515 | Not Available | Positive | 1095738 - 1096136 | 15404.5 |
| duf262 domain-containing protein | DW935_04530 | Not Available | Positive | 1097564 - 1099381 | 71270.4 |
| duf262 domain-containing protein | DW935_04535 | Not Available | Positive | 1099347 - 1101560 | 87245.6 |
| hypothetical protein | DW935_04540 | Not Available | Negative | 1101739 - 1102008 | 9895.06 |
| hypothetical protein | DW935_04545 | Not Available | Negative | 1102479 - 1104146 | 64896.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

