Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hdig domain-containing protein | DW935_04425 | Not Available | Negative | 1073994 - 1074530 | 20311.5 |
| duf1343 domain-containing protein | DW935_04430 | Not Available | Positive | 1074584 - 1075744 | 43609.9 |
| s26 family signal peptidase | DW935_04435 | Not Available | Negative | 1075772 - 1076239 | 18099.4 |
| hypothetical protein | DW935_04440 | Not Available | Negative | 1076208 - 1077122 | 33808.3 |
| abc transporter atp-binding protein | DW935_04445 | Not Available | Negative | 1077106 - 1078758 | 61645.1 |
| hypothetical protein | DW935_04450 | Not Available | Negative | 1078766 - 1079851 | 41314.3 |
| pqqd family protein | DW935_04455 | Not Available | Negative | 1079889 - 1080158 | 10032.2 |
| cell surface protein | DW935_04460 | Not Available | Negative | 1080271 - 1083105 | 98060.1 |
| hypothetical protein | DW935_04465 | Not Available | Positive | 1084109 - 1084312 | 7982.77 |
| integrase | DW935_04480 | Not Available | Positive | 1086833 - 1087636 | 31455.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

