Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glpgli family protein | DW935_04325 | Not Available | Negative | 1039677 - 1040543 | 32859.3 |
| sensor histidine kinase | DW935_04330 | Not Available | Positive | 1040714 - 1042147 | 55109.1 |
| dna-binding response regulator | DW935_04335 | Not Available | Positive | 1042170 - 1042871 | 26966.6 |
| n-acetylglucosamine-6-phosphate deacetylase | DW935_04340 | Not Available | Negative | 1042940 - 1044103 | 42239.2 |
| duf4982 domain-containing protein | DW935_04345 | Not Available | Negative | 1044279 - 1046783 | 94167.0 |
| glycoside hydrolase family 92 protein | DW935_04350 | Not Available | Negative | 1046786 - 1049038 | 85487.5 |
| beta-n-acetylhexosaminidase | DW935_04355 | Not Available | Negative | 1049065 - 1051119 | 77101.7 |
| cyclically-permuted mutarotase family protein | DW935_04360 | Not Available | Negative | 1051116 - 1052243 | 40523.6 |
| beta-n-acetylhexosaminidase | DW935_04365 | Not Available | Negative | 1052430 - 1054754 | 86343.0 |
| glycoside hydrolase family 2 protein | DW935_04370 | Not Available | Negative | 1054771 - 1057338 | 98674.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

