Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrb/acrd/acrf family protein | DW935_04275 | Not Available | Positive | 1027525 - 1030650 | 115862.0 |
| tolc family protein | DW935_04280 | Not Available | Positive | 1030684 - 1032063 | 51471.9 |
| dna-binding protein | DW935_04285 | Not Available | Negative | 1032278 - 1032982 | 27007.7 |
| hypothetical protein | DW935_04290 | Not Available | Negative | 1032948 - 1033067 | 4138.87 |
| hypothetical protein | DW935_04295 | Not Available | Positive | 1033387 - 1034058 | 25597.6 |
| sigma-70 family rna polymerase sigma factor | DW935_04300 | Not Available | Positive | 1034211 - 1034684 | 19014.9 |
| hypothetical protein | DW935_04305 | Not Available | Positive | 1034697 - 1035275 | 22985.1 |
| hypothetical protein | DW935_04310 | Not Available | Positive | 1035352 - 1036281 | 35547.2 |
| atp-binding cassette domain-containing protein | DW935_04315 | Not Available | Positive | 1036278 - 1036955 | 25555.1 |
| carboxypeptidase-like regulatory domain-containing protein | DW935_04320 | Not Available | Negative | 1037012 - 1039672 | 102323.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

