Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_00010 | Not Available | Negative | 1204 - 1389 | 7342.25 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2115 - 5006 | Not Available |
| ragb/susd family nutrient uptake outer membrane protein | DW935_00015 | Not Available | Negative | 1394 - 3328 | 71617.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 5085 - 5195 | Not Available |
| tonb-dependent receptor | DW935_00020 | Not Available | Negative | 3343 - 6414 | 113152.0 |
| glycoside hydrolase family 43 protein | DW935_00025 | Not Available | Negative | 6456 - 8192 | 64613.4 |
| alpha-n-arabinofuranosidase | DW935_00030 | Not Available | Negative | 8542 - 9513 | 36703.9 |
| endo-1,4-beta-xylanase | DW935_00035 | Not Available | Negative | 9526 - 10647 | 42053.5 |
| mfs transporter | DW935_00040 | Not Available | Negative | 10687 - 12180 | 54486.8 |
| glycoside hydrolase family 16 protein | DW935_00045 | Not Available | Negative | 12508 - 13299 | 30525.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

