Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4891 domain-containing protein | DW935_04075 | Not Available | Negative | 981522 - 981920 | 14987.3 |
| duf308 domain-containing protein | DW935_04080 | Not Available | Negative | 981931 - 982497 | 20327.0 |
| ytxh domain-containing protein | DW935_04085 | Not Available | Positive | 982979 - 983239 | 9298.99 |
| tryptophan synthase subunit beta | DW935_04090 | Not Available | Positive | 983490 - 984689 | 43987.0 |
| anthranilate synthase component i family protein | DW935_04095 | Not Available | Positive | 984750 - 986150 | 52812.4 |
| aminodeoxychorismate/anthranilate synthase component ii | DW935_04100 | Not Available | Positive | 986163 - 986753 | 21573.0 |
| anthranilate phosphoribosyltransferase | DW935_04105 | Not Available | Positive | 986775 - 987770 | 36463.1 |
| indole-3-glycerol phosphate synthase trpc | DW935_04110 | Not Available | Positive | 987809 - 988597 | 29293.4 |
| phosphoribosylanthranilate isomerase | DW935_04115 | Not Available | Positive | 988610 - 989227 | 22898.4 |
| tryptophan synthase subunit alpha | DW935_04120 | Not Available | Positive | 989224 - 990000 | 28989.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

