Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1705 domain-containing protein | DW935_04025 | Not Available | Negative | 964906 - 966612 | 65001.3 |
| hypothetical protein | DW935_04030 | Not Available | Negative | 966599 - 967786 | 45275.1 |
| tolc family protein | DW935_04035 | Not Available | Negative | 967935 - 969227 | 48388.8 |
| acrb/acrd/acrf family protein | DW935_04040 | Not Available | Negative | 969227 - 972274 | 112577.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW935_04045 | Not Available | Negative | 972293 - 973348 | 38693.3 |
| arac family transcriptional regulator | DW935_04050 | Not Available | Positive | 973512 - 974357 | 32510.7 |
| hypothetical protein | DW935_04055 | Not Available | Negative | 974364 - 976529 | 78912.0 |
| hypothetical protein | DW935_04060 | Not Available | Positive | 976609 - 977994 | 50940.9 |
| hypothetical protein | DW935_04065 | Not Available | Positive | 978021 - 978926 | 35070.8 |
| s9 family peptidase | DW935_04070 | Not Available | Negative | 978983 - 981433 | 91301.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

