Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate sugar epimerase | DW935_03870 | Not Available | Negative | 932583 - 933791 | 45770.0 |
| hypothetical protein | DW935_03875 | Not Available | Negative | 934028 - 934462 | 16426.7 |
| dna-binding protein | DW935_03880 | Not Available | Positive | 934650 - 935150 | 17891.4 |
| hypothetical protein | DW935_03885 | Not Available | Positive | 935147 - 935539 | 14727.0 |
| n-acetylmuramoyl-l-alanine amidase | DW935_03890 | Not Available | Positive | 935678 - 936097 | 15438.4 |
| transcriptional regulator | DW935_03895 | Not Available | Negative | 936163 - 936993 | 31690.1 |
| hypothetical protein | DW935_03900 | Not Available | Negative | 937417 - 939456 | 79671.4 |
| alpha-l-fucosidase | DW935_03905 | Not Available | Negative | 939475 - 940824 | 51845.6 |
| dna/rna non-specific endonuclease | DW935_03910 | Not Available | Positive | 940949 - 941806 | 32389.9 |
| alpha-n-arabinofuranosidase | DW935_03915 | Not Available | Negative | 941896 - 943419 | 57343.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

