Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_03820 | Not Available | Negative | 922721 - 923398 | 26634.4 |
| gfo/idh/moca family oxidoreductase | DW935_03825 | Not Available | Negative | 923429 - 924364 | 34871.7 |
| dehydrogenase | DW935_03830 | Not Available | Negative | 924381 - 925334 | 35906.3 |
| nucleotidyltransferase | DW935_03835 | Not Available | Negative | 925354 - 926394 | 40030.5 |
| acylneuraminate cytidylyltransferase family protein | DW935_03840 | Not Available | Negative | 926400 - 927095 | 25975.1 |
| n-acetylneuraminate synthase | DW935_03845 | Not Available | Negative | 927111 - 928115 | 36911.4 |
| atp-grasp domain-containing protein | DW935_03850 | Not Available | Negative | 928108 - 929100 | 37688.1 |
| diaminopimelate decarboxylase | DW935_03855 | Not Available | Negative | 929118 - 930293 | 44601.6 |
| udp-n-acetylglucosamine 2-epimerase (hydrolyzing) | DW935_03860 | Not Available | Negative | 930280 - 931413 | 42124.0 |
| legc family aminotransferase | DW935_03865 | Not Available | Negative | 931410 - 932564 | 43371.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

