Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trigger factor | DW935_03720 | Not Available | Negative | 901937 - 903292 | 51542.8 |
| rna-binding protein | DW935_03725 | Not Available | Positive | 903674 - 903919 | 9049.81 |
| lps export abc transporter atp-binding protein | DW935_03730 | Not Available | Negative | 903994 - 904815 | 31018.3 |
| abc transporter permease | DW935_03735 | Not Available | Positive | 904944 - 905687 | 27369.4 |
| abc transporter atp-binding protein | DW935_03740 | Not Available | Positive | 905684 - 906448 | 28911.9 |
| ribosome biogenesis gtpase der | DW935_03745 | Not Available | Negative | 906526 - 907839 | 49388.4 |
| gtpase era | DW935_03750 | Not Available | Negative | 907873 - 908754 | 33673.8 |
| ketoacyl-acp synthase iii | DW935_03755 | Not Available | Negative | 908837 - 909841 | 36862.4 |
| 50s ribosomal protein l32 | DW935_03760 | Not Available | Negative | 909946 - 910131 | 6838.3 |
| duf177 domain-containing protein | DW935_03765 | Not Available | Negative | 910143 - 910676 | 19819.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

