Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_03665 | Not Available | Negative | 887007 - 888674 | 63864.4 |
| peptidylprolyl isomerase | DW935_03670 | Not Available | Negative | 888692 - 890050 | 52289.8 |
| peptidyl-prolyl cis-trans isomerase | DW935_03675 | Not Available | Negative | 890055 - 890927 | 34134.5 |
| peptidylprolyl isomerase | DW935_03680 | Not Available | Negative | 890964 - 892301 | 52148.3 |
| imp dehydrogenase | DW935_03685 | Not Available | Negative | 892314 - 893789 | 52760.1 |
| hypothetical protein | DW935_03695 | Not Available | Positive | 894041 - 894475 | 17227.5 |
| helicase | DW935_03700 | Not Available | Negative | 894599 - 896695 | 80684.4 |
| dna helicase recq | DW935_03705 | Not Available | Negative | 897373 - 899553 | 81679.6 |
| atp-dependent clp protease atp-binding subunit clpx | DW935_03710 | Not Available | Negative | 899711 - 900961 | 46679.9 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | DW935_03715 | Not Available | Negative | 901085 - 901756 | 24864.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

