Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DW935_03565 | Not Available | Negative | 864458 - 865108 | 24599.1 |
| Trna-val | Not Available | Not Available | Positive | 865177 - 865254 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 865292 - 865369 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 865408 - 865482 | Not Available |
| tryptophan--trna ligase | DW935_03585 | Not Available | Negative | 865698 - 866792 | 41376.8 |
| hypothetical protein | DW935_03590 | Not Available | Positive | 866896 - 867687 | 29912.6 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DW935_03595 | Not Available | Positive | 867942 - 871163 | 119466.0 |
| tonb-dependent receptor | DW935_03600 | Not Available | Negative | 871229 - 874033 | 106631.0 |
| tlpa family protein disulfide reductase | DW935_03605 | Not Available | Negative | 874054 - 874554 | 19123.4 |
| peroxide stress protein yaaa | DW935_03610 | Not Available | Positive | 874642 - 875409 | 29392.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

