Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_03500 | Not Available | Negative | 850677 - 851348 | 25912.2 |
| duf4377 domain-containing protein | DW935_03505 | Not Available | Negative | 851408 - 852301 | 34446.9 |
| hypothetical protein | DW935_03510 | Not Available | Negative | 852409 - 853416 | 38240.5 |
| hypothetical protein | DW935_03520 | Not Available | Negative | 854790 - 855017 | 8306.03 |
| dead/deah box helicase | DW935_03530 | Not Available | Negative | 856607 - 857911 | 48294.5 |
| hypothetical protein | DW935_03540 | Not Available | Negative | 858337 - 858852 | 19807.7 |
| hypothetical protein | DW935_03545 | Not Available | Negative | 858872 - 861328 | 89618.5 |
| endonuclease/exonuclease/phosphatase family protein | DW935_03550 | Not Available | Negative | 861356 - 862294 | 34990.7 |
| cysteine synthase a | DW935_03555 | Not Available | Positive | 862440 - 863390 | 33551.6 |
| trna 2-thiouridine(34) synthase mnma | DW935_03560 | Not Available | Positive | 863397 - 864461 | 39768.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

