Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | DW935_03335 | Not Available | Negative | 801337 - 802182 | 31469.7 |
| deor/glpr transcriptional regulator | DW935_03340 | Not Available | Negative | 802525 - 803280 | 27350.1 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | DW935_03345 | Not Available | Negative | 803292 - 803906 | 22216.8 |
| duf5060 domain-containing protein | DW935_03350 | Not Available | Negative | 804028 - 805632 | 61953.0 |
| hybrid sensor histidine kinase/response regulator | DW935_03355 | Not Available | Negative | 805797 - 810119 | 165156.0 |
| hypothetical protein | DW935_03360 | Not Available | Negative | 810333 - 811013 | 24731.3 |
| arac family transcriptional regulator | DW935_03365 | Not Available | Positive | 811225 - 812127 | 35311.8 |
| nucleotidyltransferase | DW935_03370 | Not Available | Negative | 812231 - 813142 | 33769.1 |
| hypothetical protein | DW935_03375 | Not Available | Negative | 813277 - 815634 | 88967.5 |
| hypothetical protein | DW935_03380 | Not Available | Negative | 815631 - 820280 | 171769.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

