Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | DW935_03235 | Not Available | Negative | 774310 - 775437 | 43582.4 |
| tonb-dependent receptor | DW935_03240 | Not Available | Positive | 776037 - 779099 | 113307.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_03245 | Not Available | Positive | 779115 - 780866 | 66095.7 |
| gfo/idh/moca family oxidoreductase | DW935_03250 | Not Available | Positive | 781197 - 782615 | 53407.9 |
| carbonic anhydrase | DW935_03255 | Not Available | Negative | 782739 - 783278 | 19937.5 |
| crp/fnr family transcriptional regulator | DW935_03260 | Not Available | Negative | 783469 - 784053 | 22223.6 |
| mate family efflux transporter | DW935_03265 | Not Available | Negative | 784089 - 785441 | 49552.6 |
| Trna-thr | Not Available | Not Available | Positive | 785594 - 785667 | Not Available |
| molecular chaperone groel | DW935_03275 | Not Available | Negative | 785915 - 787552 | 58147.1 |
| co-chaperone groes | DW935_03280 | Not Available | Negative | 787594 - 787866 | 9740.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

