Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM43-4BH
Accession NumberQSFK00000000.1
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative nuclease | DW935_20135 | Not Available | + | 4664560 - 4665192 | 24741.7 |
| Large terminase | DW935_20140 | Not Available | + | 4664735 - 4665358 | 23763.5 |
| Phage portal protein | DW935_20145 | Not Available | + | 4665370 - 4666863 | 57366.7 |
| Duf2136 superfamily protein | DW935_20150 | Not Available | + | 4667033 - 4667326 | 11494.8 |
| Dna-binding protein | DW935_20155 | Not Available | + | 4667331 - 4667696 | 13584.5 |
| hypothetical protein | DW935_20160 | Not Available | + | 4667871 - 4668506 | 23488.4 |
| Capsid fiber protein | DW935_20165 | Not Available | + | 4668511 - 4669362 | 30509.4 |
| hypothetical protein | DW935_20170 | Not Available | + | 4669381 - 4670463 | 40868.1 |
| Hypothetical protein | DW935_20175 | Not Available | + | 4670460 - 4670774 | 11648.0 |
| hypothetical protein | DW935_20180 | Not Available | + | 4670771 - 4671094 | 12239.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
