Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_03130 | Not Available | Negative | 752562 - 753626 | 40208.2 |
| hypothetical protein | DW935_03135 | Not Available | Negative | 753705 - 753965 | 9561.44 |
| electron transfer flavoprotein beta subunit/fixa family protein | DW935_03140 | Not Available | Positive | 754332 - 755225 | 31873.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DW935_03145 | Not Available | Positive | 755231 - 756250 | 36756.3 |
| four helix bundle protein | DW935_03150 | Not Available | Positive | 756286 - 756666 | 14337.4 |
| acyl-coa dehydrogenase | DW935_03155 | Not Available | Positive | 756708 - 758414 | 63864.0 |
| histidine decarboxylase | DW935_03160 | Not Available | Positive | 758873 - 759481 | 22182.6 |
| paai family thioesterase | DW935_03165 | Not Available | Negative | 759561 - 759971 | 14751.8 |
| duf2027 domain-containing protein | DW935_03170 | Not Available | Negative | 759999 - 761087 | 41096.4 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | DW935_03175 | Not Available | Positive | 761152 - 762369 | 46273.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

