Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1232 domain-containing protein | DW935_03080 | Not Available | Negative | 738726 - 739088 | 13988.2 |
| tonb-dependent receptor | DW935_03085 | Not Available | Negative | 739233 - 741557 | 88504.1 |
| sensor histidine kinase | DW935_03090 | Not Available | Positive | 741713 - 743209 | 56829.7 |
| mechanosensitive ion channel family protein | DW935_03095 | Not Available | Negative | 743328 - 744521 | 45221.0 |
| multidrug efflux rnd transporter permease subunit | DW935_03100 | Not Available | Negative | 744638 - 747754 | 112560.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW935_03105 | Not Available | Negative | 747759 - 748889 | 41358.6 |
| tolc family protein | DW935_03110 | Not Available | Negative | 748944 - 750341 | 52018.1 |
| hypothetical protein | DW935_03115 | Not Available | Negative | 750473 - 751015 | 19666.0 |
| signal peptidase i | DW935_03120 | Not Available | Negative | 751169 - 751990 | 32002.6 |
| hypothetical protein | DW935_03125 | Not Available | Negative | 751987 - 752565 | 22841.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

