Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_02920 | Not Available | Negative | 692611 - 693006 | 14991.0 |
| hypothetical protein | DW935_02925 | Not Available | Negative | 693053 - 693436 | 14548.6 |
| tetratricopeptide repeat protein | DW935_02935 | Not Available | Positive | 694521 - 696416 | 73989.7 |
| duf3244 domain-containing protein | DW935_02940 | Not Available | Positive | 696580 - 696993 | 15375.5 |
| hypothetical protein | DW935_02945 | Not Available | Positive | 697028 - 697267 | 9362.56 |
| hypothetical protein | DW935_02950 | Not Available | Positive | 697300 - 698214 | 35539.9 |
| peptidase domain-containing abc transporter | DW935_02955 | Not Available | Positive | 698211 - 700412 | 83543.6 |
| hlyd family efflux transporter periplasmic adaptor subunit | DW935_02960 | Not Available | Positive | 700461 - 701606 | 43737.3 |
| hypothetical protein | DW935_02965 | Not Available | Positive | 701655 - 701858 | 7562.53 |
| radical sam protein | DW935_02970 | Not Available | Positive | 701836 - 703347 | 58154.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

