Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine protease | DW935_02865 | Not Available | Negative | 678561 - 679934 | 49946.9 |
| mate family efflux transporter | DW935_02870 | Not Available | Positive | 680056 - 681426 | 49490.1 |
| cytidylate kinase-like family protein | DW935_02875 | Not Available | Positive | 681480 - 682109 | 23564.2 |
| tetratricopeptide repeat protein | DW935_02880 | Not Available | Positive | 682339 - 684195 | 72895.5 |
| duf3244 domain-containing protein | DW935_02885 | Not Available | Positive | 684354 - 684758 | 14848.9 |
| hypothetical protein | DW935_02890 | Not Available | Positive | 684902 - 685828 | 35832.6 |
| peptidase c39 | DW935_02895 | Not Available | Positive | 685949 - 686536 | 23231.6 |
| hypothetical protein | DW935_02905 | Not Available | Negative | 688335 - 690644 | 87830.4 |
| radical sam protein | DW935_02910 | Not Available | Negative | 690680 - 692059 | 52552.6 |
| hypothetical protein | DW935_02915 | Not Available | Negative | 692187 - 692387 | 7208.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

