Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-specific glutamate dehydrogenase | DW935_02765 | Not Available | Positive | 657538 - 658875 | 48494.3 |
| hypothetical protein | DW935_02770 | Not Available | Positive | 659037 - 659429 | 15101.9 |
| duf3440 domain-containing protein | DW935_02775 | Not Available | Positive | 659422 - 660723 | 52313.9 |
| chromosome partitioning protein parb | DW935_02780 | Not Available | Positive | 660720 - 661232 | 19744.9 |
| hypothetical protein | DW935_02785 | Not Available | Positive | 661260 - 663044 | 65138.5 |
| malate dehydrogenase | DW935_02790 | Not Available | Negative | 663142 - 664083 | 32849.0 |
| hypothetical protein | DW935_02795 | Not Available | Positive | 664240 - 665112 | 33451.4 |
| tolc family protein | DW935_02800 | Not Available | Positive | 665327 - 666790 | 53434.7 |
| biotin/lipoyl-binding protein | DW935_02805 | Not Available | Positive | 666817 - 667803 | 35945.9 |
| abc transporter permease | DW935_02810 | Not Available | Positive | 667810 - 668985 | 44257.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

