Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DW935_02715 | Not Available | Negative | 639678 - 641063 | 50365.3 |
| acrb/acrd/acrf family protein | DW935_02720 | Not Available | Negative | 641075 - 644293 | 116876.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW935_02725 | Not Available | Negative | 644347 - 645558 | 43695.5 |
| nadp-dependent malic enzyme | DW935_02730 | Not Available | Positive | 645999 - 648284 | 84255.2 |
| hypothetical protein | DW935_02735 | Not Available | Positive | 648413 - 648595 | 6713.74 |
| nadp-specific glutamate dehydrogenase | DW935_02740 | Not Available | Positive | 648751 - 650085 | 49002.8 |
| hypothetical protein | DW935_02745 | Not Available | Positive | 650241 - 651389 | 42457.7 |
| port family protein | DW935_02750 | Not Available | Positive | 651398 - 652174 | 29116.1 |
| duf4925 domain-containing protein | DW935_02755 | Not Available | Negative | 653031 - 654236 | 43424.5 |
| phosphoenolpyruvate synthase | DW935_02760 | Not Available | Negative | 654346 - 657303 | 112937.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

