Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_20085 | Not Available | Positive | 4658976 - 4659224 | 9616.56 |
| hypothetical protein | DW935_20090 | Not Available | Positive | 4659267 - 4659650 | 14406.9 |
| hypothetical protein | DW935_20095 | Not Available | Positive | 4659690 - 4659947 | 10010.3 |
| hypothetical protein | DW935_20100 | Not Available | Positive | 4659984 - 4660184 | 7441.17 |
| duf3873 domain-containing protein | DW935_20105 | Not Available | Positive | 4660324 - 4660530 | 7935.4 |
| Hypothetical protein | DW935_20110 | Not Available | Positive | 4660636 - 4661088 | 17598.8 |
| Adenine nucleotide alpha hydrolase-like protein | DW935_20115 | Not Available | Positive | 4661298 - 4661987 | 27195.9 |
| Parb-like nuclease | DW935_20120 | Not Available | Positive | 4661965 - 4662669 | 26596.6 |
| Transposase/terminase small subunit | DW935_20125 | Not Available | Positive | 4662672 - 4663166 | 18912.6 |
| Phage terminase large subunit | DW935_20130 | Not Available | Positive | 4663163 - 4664341 | 44995.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

