Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | DW935_02665 | Not Available | Positive | 627472 - 628209 | 27125.9 |
| mboat family protein | DW935_02670 | Not Available | Negative | 628266 - 629747 | 57278.7 |
| hypothetical protein | DW935_02675 | Not Available | Negative | 629725 - 630687 | 35950.6 |
| hypothetical protein | DW935_02680 | Not Available | Negative | 630674 - 632041 | 50814.9 |
| hypothetical protein | DW935_02685 | Not Available | Negative | 632178 - 632471 | 11224.5 |
| acrb/acrd/acrf family protein | DW935_02690 | Not Available | Negative | 632544 - 635714 | 115813.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW935_02695 | Not Available | Negative | 635796 - 636818 | 37702.9 |
| tolc family protein | DW935_02700 | Not Available | Negative | 636842 - 638167 | 49635.6 |
| tetr/acrr family transcriptional regulator | DW935_02705 | Not Available | Negative | 638204 - 638857 | 25454.9 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DW935_02710 | Not Available | Negative | 638887 - 639654 | 27537.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

