Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor n(5)-glutamine methyltransferase | DW935_02610 | Not Available | Positive | 620201 - 621037 | 31898.4 |
| recx family transcriptional regulator | DW935_02615 | Not Available | Positive | 621039 - 621524 | 18883.8 |
| comf family protein | DW935_02620 | Not Available | Positive | 621505 - 622200 | 26038.9 |
| orotate phosphoribosyltransferase | DW935_02625 | Not Available | Positive | 622300 - 622938 | 23412.4 |
| srpbcc family protein | DW935_02630 | Not Available | Positive | 623036 - 623440 | 15197.6 |
| argininosuccinate lyase | DW935_02635 | Not Available | Positive | 623455 - 624795 | 50611.4 |
| l-glyceraldehyde 3-phosphate reductase | DW935_02640 | Not Available | Positive | 624819 - 625811 | 36745.0 |
| Trna-gly | Not Available | Not Available | Positive | 625883 - 625955 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 625972 - 626059 | Not Available |
| hypothetical protein | DW935_02660 | Not Available | Positive | 627142 - 627438 | 11622.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

