Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | DW935_02510 | Not Available | Negative | 595939 - 596964 | 39514.3 |
| lipopolysaccharide biosynthesis protein | DW935_02515 | Not Available | Negative | 596964 - 598400 | 53556.4 |
| methionine--trna ligase | DW935_02520 | Not Available | Negative | 598482 - 600524 | 77707.8 |
| atp-binding protein | DW935_02525 | Not Available | Negative | 600980 - 602518 | 56291.0 |
| duf4369 domain-containing protein | DW935_02530 | Not Available | Negative | 602523 - 603590 | 40460.1 |
| tetratricopeptide repeat protein | DW935_02535 | Not Available | Negative | 603744 - 605420 | 60893.8 |
| site-specific tyrosine recombinase xerd | DW935_02540 | Not Available | Negative | 605562 - 606503 | 36180.1 |
| type ii 3-dehydroquinate dehydratase | DW935_02545 | Not Available | Positive | 606570 - 606992 | 15686.0 |
| pyruvate kinase | DW935_02550 | Not Available | Positive | 607025 - 608488 | 54241.6 |
| methyltransferase | DW935_02555 | Not Available | Positive | 608504 - 609142 | 24383.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

