Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | DW935_02460 | Not Available | Negative | 583862 - 584557 | 25496.5 |
| hypothetical protein | DW935_02465 | Not Available | Positive | 584642 - 587134 | 93034.4 |
| glycosyltransferase | DW935_02470 | Not Available | Negative | 587160 - 587906 | 28692.4 |
| glycosyltransferase | DW935_02475 | Not Available | Negative | 587899 - 589161 | 47697.5 |
| glycosyltransferase | DW935_02480 | Not Available | Negative | 589174 - 590289 | 42979.5 |
| hemolysin activation protein | DW935_02485 | Not Available | Negative | 590262 - 591278 | 40425.5 |
| licd family protein | DW935_02490 | Not Available | Negative | 591292 - 592089 | 31703.4 |
| nad/nadp octopine/nopaline dehydrogenase | DW935_02495 | Not Available | Negative | 592093 - 593193 | 41231.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DW935_02500 | Not Available | Negative | 593190 - 594995 | 70230.3 |
| glycosyl transferase | DW935_02505 | Not Available | Positive | 595086 - 595916 | 31878.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

