Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3868 domain-containing protein | DW935_02410 | Not Available | Positive | 573747 - 575207 | 54271.7 |
| hypothetical protein | DW935_02415 | Not Available | Positive | 575394 - 575696 | 11858.8 |
| hypothetical protein | DW935_02420 | Not Available | Positive | 576032 - 577729 | 63058.4 |
| hypothetical protein | DW935_02425 | Not Available | Positive | 577814 - 578860 | 39305.3 |
| hypothetical protein | DW935_02430 | Not Available | Positive | 578884 - 579987 | 40347.9 |
| duf4906 domain-containing protein | DW935_02435 | Not Available | Positive | 580024 - 582138 | 78916.1 |
| hypothetical protein | DW935_02440 | Not Available | Positive | 582156 - 582401 | 9361.5 |
| hypothetical protein | DW935_02445 | Not Available | Positive | 582413 - 582712 | 12076.5 |
| 30s ribosomal protein s15 | DW935_02450 | Not Available | Positive | 582993 - 583262 | 10364.5 |
| s-ribosylhomocysteine lyase | DW935_02455 | Not Available | Negative | 583365 - 583850 | 18473.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

