Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 558916 - 558990 | Not Available |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | DW935_02365 | Not Available | Positive | 559401 - 561248 | 66247.6 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | DW935_02370 | Not Available | Positive | 561272 - 562276 | 36538.8 |
| uracil phosphoribosyltransferase | DW935_02375 | Not Available | Negative | 562433 - 563092 | 24424.5 |
| phosphoenolpyruvate carboxykinase (atp) | DW935_02380 | Not Available | Positive | 563353 - 564960 | 59092.1 |
| proton-conducting membrane transporter | DW935_02385 | Not Available | Positive | 565066 - 565716 | 23949.2 |
| translational gtpase typa | DW935_02390 | Not Available | Negative | 565777 - 567579 | 67346.3 |
| response regulator | DW935_02395 | Not Available | Negative | 567646 - 571767 | 157412.0 |
| duf5033 domain-containing protein | DW935_02400 | Not Available | Negative | 572120 - 572725 | 22809.1 |
| duf3575 domain-containing protein | DW935_02405 | Not Available | Positive | 573165 - 573734 | 21771.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

