Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | DW935_02210 | Not Available | Negative | 511063 - 511506 | 17322.7 |
| hydroxymyristoyl-acp dehydratase | DW935_02215 | Not Available | Negative | 511503 - 511940 | 16448.2 |
| methyltransferase domain-containing protein | DW935_02220 | Not Available | Negative | 511937 - 513007 | 40576.6 |
| acyltransferase | DW935_02225 | Not Available | Negative | 513021 - 513905 | 34490.0 |
| acyl carrier protein | DW935_02230 | Not Available | Negative | 513905 - 514156 | 9584.45 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DW935_02235 | Not Available | Negative | 514178 - 515407 | 44224.5 |
| 3-oxoacyl-acp reductase fabg | DW935_02240 | Not Available | Negative | 515415 - 516143 | 26439.8 |
| aromatic amino acid lyase | DW935_02245 | Not Available | Negative | 516140 - 517711 | 59145.6 |
| cysteine--trna ligase | DW935_02250 | Not Available | Negative | 517899 - 519380 | 56306.0 |
| arabinan endo-1,5-alpha-l-arabinosidase | DW935_02255 | Not Available | Negative | 519755 - 521638 | 70261.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

