Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_18145 | Not Available | Positive | 4261226 - 4262188 | 33285.4 |
| hypothetical protein | DW935_18150 | Not Available | Positive | 4262211 - 4262621 | 14758.5 |
| hypothetical protein | DW935_18155 | Not Available | Positive | 4262670 - 4263212 | 20069.4 |
| hypothetical protein | DW935_18160 | Not Available | Positive | 4263215 - 4263496 | 10981.8 |
| hypothetical protein | DW935_18165 | Not Available | Positive | 4263537 - 4263956 | 16153.2 |
| hypothetical protein | DW935_18170 | Not Available | Positive | 4263953 - 4264375 | 16590.9 |
| Dna-damage-inducible protein d | DW935_18175 | Not Available | Positive | 4264544 - 4265344 | 30685.9 |
| Integrase | DW935_18180 | Not Available | Negative | 4265771 - 4266919 | 44983.4 |
| Attr | Not Available | Not Available | Positive | 4270424 - 4270435 | Not Available |
| Transcriptional regulator, xre family | DW935_20080 | Not Available | Negative | 4658476 - 4658781 | 11229.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

