Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymyristoyl-acp dehydratase | DW935_02110 | Not Available | Negative | 489563 - 489943 | 14303.6 |
| hypothetical protein | DW935_02115 | Not Available | Negative | 489945 - 490487 | 20818.8 |
| outer membrane lipoprotein carrier protein lola | DW935_02120 | Not Available | Negative | 490462 - 491097 | 24752.3 |
| tetratricopeptide repeat protein | DW935_02125 | Not Available | Positive | 491757 - 493271 | 59568.5 |
| duf3244 domain-containing protein | DW935_02130 | Not Available | Positive | 493362 - 493754 | 14781.2 |
| hypothetical protein | DW935_02135 | Not Available | Positive | 493789 - 494043 | 9741.59 |
| 6-bladed beta-propeller | DW935_02140 | Not Available | Positive | 494048 - 495169 | 44111.4 |
| hypothetical protein | DW935_02145 | Not Available | Positive | 495205 - 496719 | 57637.1 |
| hypothetical protein | DW935_02150 | Not Available | Positive | 497256 - 497810 | 20858.7 |
| peptidase domain-containing abc transporter | DW935_02155 | Not Available | Positive | 497779 - 499965 | 82461.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

