Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_02060 | Not Available | Negative | 474127 - 474948 | 30751.9 |
| pas domain-containing protein | DW935_02065 | Not Available | Positive | 475147 - 477570 | 92953.8 |
| hypothetical protein | DW935_02070 | Not Available | Negative | 477688 - 478263 | 21488.1 |
| phenylacetate--coa ligase family protein | DW935_02075 | Not Available | Negative | 478314 - 479609 | 49526.5 |
| choloylglycine hydrolase | DW935_02080 | Not Available | Negative | 479611 - 481275 | 63246.5 |
| nad(p)/fad-dependent oxidoreductase | DW935_02085 | Not Available | Negative | 481268 - 482758 | 56636.9 |
| methyltransferase domain-containing protein | DW935_02090 | Not Available | Negative | 482751 - 486605 | 146579.0 |
| duf2062 domain-containing protein | DW935_02095 | Not Available | Negative | 486598 - 487791 | 44775.9 |
| duf4221 domain-containing protein | DW935_02100 | Not Available | Negative | 487913 - 489097 | 46068.8 |
| hypothetical protein | DW935_02105 | Not Available | Negative | 489170 - 489454 | 9654.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

