Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | DW935_01960 | Not Available | Negative | 442070 - 442873 | 30911.8 |
| rna polymerase sigma-70 factor | DW935_01965 | Not Available | Negative | 442943 - 443452 | 19953.8 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW935_01970 | Not Available | Negative | 443698 - 445401 | 63029.3 |
| susc/raga family tonb-linked outer membrane protein | DW935_01975 | Not Available | Negative | 445401 - 448442 | 112142.0 |
| rna polymerase sigma-70 factor | DW935_01980 | Not Available | Positive | 448763 - 449308 | 21382.9 |
| phosphoribosylglycinamide formyltransferase | DW935_01985 | Not Available | Negative | 449280 - 449858 | 21386.1 |
| acyl carrier protein | DW935_01990 | Not Available | Positive | 450011 - 450247 | 8382.75 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DW935_01995 | Not Available | Positive | 450266 - 451531 | 44849.9 |
| ribonuclease 3 | DW935_02000 | Not Available | Positive | 451534 - 452460 | 35281.3 |
| sulfatase | DW935_02005 | Not Available | Negative | 452605 - 454158 | 57831.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

