Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DW935_01910 | Not Available | Negative | 430473 - 431378 | 35430.4 |
| glycosyltransferase | DW935_01915 | Not Available | Negative | 431606 - 432505 | 34450.6 |
| hypothetical protein | DW935_01920 | Not Available | Negative | 432520 - 433272 | 29433.6 |
| glycosyltransferase family 2 protein | DW935_01925 | Not Available | Negative | 433288 - 434004 | 27429.8 |
| udp-galactopyranose mutase | DW935_01930 | Not Available | Negative | 434088 - 435194 | 42898.6 |
| acetyltransferase | DW935_01935 | Not Available | Negative | 435197 - 436120 | 37581.7 |
| glycosyltransferase family 9 protein | DW935_01940 | Not Available | Negative | 436121 - 437152 | 38600.2 |
| 4-phosphoerythronate dehydrogenase pdxb | DW935_01945 | Not Available | Positive | 437257 - 438282 | 38339.9 |
| duf4249 domain-containing protein | DW935_01950 | Not Available | Negative | 438447 - 439412 | 36368.1 |
| tonb-dependent receptor | DW935_01955 | Not Available | Negative | 439419 - 442073 | 100770.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

