Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lta synthase family protein | DW935_01860 | Not Available | Negative | 417952 - 419979 | 77455.0 |
| glycosyltransferase family 2 protein | DW935_01865 | Not Available | Negative | 420163 - 421146 | 38357.4 |
| glycosyltransferase | DW935_01870 | Not Available | Positive | 421392 - 422708 | 50556.2 |
| abc transporter atp-binding protein | DW935_01875 | Not Available | Positive | 422766 - 424604 | 68820.3 |
| glycosyltransferase | DW935_01880 | Not Available | Positive | 424606 - 425538 | 35568.7 |
| hypothetical protein | DW935_01885 | Not Available | Positive | 425547 - 425798 | 9670.05 |
| hypothetical protein | DW935_01890 | Not Available | Positive | 425810 - 425932 | 4374.19 |
| hypothetical protein | DW935_01895 | Not Available | Positive | 426269 - 427726 | 54555.8 |
| hypothetical protein | DW935_01900 | Not Available | Positive | 427848 - 429323 | 55356.9 |
| glycosyltransferase family 8 protein | DW935_01905 | Not Available | Negative | 429518 - 430468 | 37309.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

