Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1182 family transposase | DW935_22340 | Not Available | Negative | 5138570 - 5140081 | 59191.7 |
| dna cytosine methyltransferase | DW935_22345 | Not Available | Positive | 5140222 - 5141874 | 62229.7 |
| methyltransferase | DW935_22350 | Not Available | Positive | 5141874 - 5141936 | 2465.04 |
| hypothetical protein | DW935_22355 | Not Available | Negative | 5141937 - 5143147 | 45270.7 |
| mobilization protein | DW935_22360 | Not Available | Negative | 5143384 - 5143745 | 14205.9 |
| hypothetical protein | DW935_22385 | Not Available | Positive | 5147354 - 5148206 | 31794.6 |
| hypothetical protein | DW935_22390 | Not Available | Positive | 5148509 - 5148913 | 15275.8 |
| mobilization protein | DW935_22395 | Not Available | Positive | 5149053 - 5149169 | 4648.87 |
| type iv secretory system conjugative dna transfer family protein | DW935_22400 | Not Available | Negative | 5149182 - 5149838 | 24937.6 |
| conjugative transposon protein tram | DW935_22405 | Not Available | Positive | 5149839 - 5150530 | 25055.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

