Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is21 family transposase | DW935_22285 | Not Available | Negative | 5125950 - 5127548 | 61544.2 |
| hypothetical protein | DW935_22290 | Not Available | Positive | 5127729 - 5128238 | 19798.7 |
| is66-like element isbvu4 family transposase | DW935_22295 | Not Available | Positive | 5128307 - 5129920 | 61911.8 |
| site-specific integrase | DW935_22300 | Not Available | Negative | 5130615 - 5131775 | 44958.7 |
| hypothetical protein | DW935_22305 | Not Available | Positive | 5132143 - 5132363 | 7666.67 |
| hypothetical protein | DW935_22310 | Not Available | Positive | 5132412 - 5132693 | 11191.8 |
| hypothetical protein | DW935_22320 | Not Available | Positive | 5134586 - 5134912 | 12003.7 |
| hypothetical protein | DW935_22325 | Not Available | Negative | 5135216 - 5135521 | 10721.8 |
| hypothetical protein | DW935_22330 | Not Available | Negative | 5135887 - 5136447 | 21215.1 |
| is1182 family transposase | DW935_22335 | Not Available | Positive | 5136585 - 5137894 | 51152.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

