Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repa protein | DW935_22225 | Not Available | Positive | 5117941 - 5118537 | 22934.6 |
| hypothetical protein | DW935_22230 | Not Available | Positive | 5118527 - 5118799 | 10080.4 |
| hypothetical protein | DW935_22235 | Not Available | Positive | 5118868 - 5119065 | 7345.07 |
| mobilization protein | DW935_22240 | Not Available | Positive | 5119155 - 5119855 | 26665.7 |
| hypothetical protein | DW935_22245 | Not Available | Negative | 5119915 - 5120139 | 8657.85 |
| hypothetical protein | DW935_22255 | Not Available | Positive | 5120342 - 5120671 | 13164.1 |
| tetratricopeptide repeat protein | DW935_22265 | Not Available | Negative | 5122576 - 5123430 | 32554.4 |
| peptide-methionine (s)-s-oxide reductase | DW935_22270 | Not Available | Positive | 5123548 - 5124033 | 18625.0 |
| tlpa family protein disulfide reductase | DW935_22275 | Not Available | Negative | 5124102 - 5125093 | 37419.0 |
| aaa family atpase | DW935_22280 | Not Available | Negative | 5125183 - 5125938 | 28910.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

